Streptococcus salivarius
Isolate HQ 5S/16S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sp. HSISS1
NCBI Strain Identifiers HSISS1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000785515.1)
Genome Characteristics
CheckM Completeness 99.17%
CheckM Contamination 1.02%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 0
tRNA Count 19
Contig Count 41
N50 Contigs 86,160 bp
Longest Contig 251,658 bp
Scaffold Count 1
N50 Scaffolds 2,128,142 bp
Longest Scaffold 2,128,142 bp
Genome Size 2,128,142 bp
Protein Count 1,952
Coding Density 84.21%
GC Percentage 40.12%
Ambiguous Bases N/A
GTDB representative GCA_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Chromosome
Assembly Name HSISS1_1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471216
Country None
Date 2013-08-26
Genbank Assembly Accession GCA_000448645.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 1,930
Refseq Category na
Seq Rel Date 2013/08/26
Spanned Gaps 41
Species Taxid 1316410
SSU Count 0
Submitter Top Institute Food and Nutrition (TIFN)
Taxid 1316410
Total Gap Length 53244
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ASKB00000000.1