Aeromonas salmonicida
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida; sb__Aeromonas salmonicida subsp. pectinolytica; x__Aeromonas salmonicida subsp. pectinolytica 34mel
NCBI Strain Identifiers 34mel
GTDB Type Material Designation type strain of subspecies
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 253
N50 Contigs 47,147 bp
Longest Contig 327,967 bp
Scaffold Count 253
N50 Scaffolds 47,147 bp
Longest Scaffold 327,967 bp
Genome Size 4,767,351 bp
Protein Count 4,434
Coding Density 86.88%
GC Percentage 58.48%
Ambiguous Bases 0
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM44743v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03322533
Country Argentina: Matanza River; Buenos Aires
Date 2015-4-23
Genbank Assembly Accession GCA_000447435.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source extremely polluted river water
Latitude Longitude None
Molecule Count 0
Protein Count 4,339
Refseq Category na
Seq Rel Date 2015/04/23
Spanned Gaps 0
Species Taxid 645
SSU Count 1
Submitter Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires
Taxid 1324960
Total Gap Length 0
Translation Table 11
tRNA Count (total) 83
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ARYZ00000000.2