Escherichia dysenteriae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia dysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli C154_11
NCBI Strain Identifiers C154_11
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002949675.1)
Genome Characteristics
CheckM Completeness 99.72%
CheckM Contamination 0.06%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 349
N50 Contigs 148,917 bp
Longest Contig 593,752 bp
Scaffold Count 349
N50 Scaffolds 148,917 bp
Longest Scaffold 593,752 bp
Genome Size 5,160,295 bp
Protein Count 5,066
Coding Density 88.04%
GC Percentage 50.41%
Ambiguous Bases N/A
GTDB representative GCA_002949675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM44613v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436000
Country Denmark
Date 2013-8-13
Genbank Assembly Accession GCA_000446135.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source stool sample
Latitude Longitude None
Molecule Count N/A
CDS Count 5,509
Refseq Category na
Seq Rel Date 2013/08/13
Spanned Gaps 0
Species Taxid 562
SSU Count 2
Submitter University of Maryland School of Medicine
Taxid 1124987
Total Gap Length 0
Translation Table 11
tRNA Count (total) 81
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AIAF00000000.1