Glaesserella parasuis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Glaesserella; s__Glaesserella parasuis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Glaesserella; s__Glaesserella parasuis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Glaesserella; s__Glaesserella parasuis; x__Glaesserella parasuis 12939
NCBI Strain Identifiers 12939
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002015085.1)
Genome Characteristics
CheckM Completeness 91.46%
CheckM Contamination 1.02%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 2
23S Count 4
tRNA Count 20
Contig Count 76
N50 Contigs 48,588 bp
Longest Contig 265,427 bp
Scaffold Count 76
N50 Scaffolds 48,588 bp
Longest Scaffold 265,427 bp
Genome Size 1,953,029 bp
Protein Count 1,900
Coding Density 87.57%
GC Percentage 39.85%
Ambiguous Bases N/A
GTDB representative GCA_002015085.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM44460v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470072
Country USA
Date 2013-08-07
Genbank Assembly Accession GCA_000444605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source lung
Latitude Longitude None
Molecule Count N/A
CDS Count 1,926
Refseq Category na
Seq Rel Date 2013/08/07
Spanned Gaps 0
Species Taxid 738
SSU Count 5
Submitter Iowa State University
Taxid 1275968
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master APBW00000000.1