Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus SA16
NCBI Strain Identifiers SA16
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 74
N50 Contigs 398,878 bp
Longest Contig 594,316 bp
Scaffold Count 74
N50 Scaffolds 398,878 bp
Longest Scaffold 594,316 bp
Genome Size 2,961,555 bp
Protein Count 2,781
Coding Density 83.44%
GC Percentage 32.85%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name SA16 genome assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02179359
Country Brazil
Date 2013-07-31
Genbank Assembly Accession GCA_000442355.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Blood
Latitude Longitude 19.817805 S 43.948492 W
Molecule Count N/A
CDS Count 3,061
Refseq Category na
Seq Rel Date 2013/07/31
Spanned Gaps 0
Species Taxid 1280
SSU Count 5
Submitter University of Sao Paulo
Taxid 1336252
Total Gap Length 0
Translation Table 11
tRNA Count (total) 61
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ASZO00000000.1