Streptococcus suis
Isolate HQ 5S/16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis; x__Streptococcus suis 4417
NCBI Strain Identifiers 4417
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000294495.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.06%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 16
Contig Count 93
N50 Contigs 58,579 bp
Longest Contig 123,172 bp
Scaffold Count 93
N50 Scaffolds 58,579 bp
Longest Scaffold 123,172 bp
Genome Size 2,221,173 bp
Protein Count 2,171
Coding Density 88.70%
GC Percentage 41.13%
Ambiguous Bases N/A
GTDB representative GCA_000294495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name version1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469534
Country None
Date 2013-07-25
Genbank Assembly Accession GCA_000440475.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,204
Refseq Category na
Seq Rel Date 2013/07/25
Spanned Gaps 0
Species Taxid 1307
SSU Count 1
Submitter National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control
Taxid 1214155
Total Gap Length 0
Translation Table 11
tRNA Count (total) 28
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALLC00000000.1