Campylobacter_D jejuni
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D jejuni
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni; x__Campylobacter jejuni BJ-CJD101
NCBI Strain Identifiers BJ-CJD101
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457695.1)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.23%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 22
N50 Contigs 165,377 bp
Longest Contig 323,511 bp
Scaffold Count 9
N50 Scaffolds 351,413 bp
Longest Scaffold 747,769 bp
Genome Size 1,616,018 bp
Protein Count 1,636
Coding Density 93.65%
GC Percentage 30.48%
Ambiguous Bases N/A
GTDB representative GCA_001457695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name BJ-CJD101
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470629
Country China: Beijing
Date 2013-7-30
Genbank Assembly Accession GCA_000440015.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source stool specimen of one diarrheal patient
Latitude Longitude None
Molecule Count N/A
CDS Count 1,642
Refseq Category na
Seq Rel Date 2013/07/30
Spanned Gaps 13
Species Taxid 197
SSU Count 1
Submitter National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
Taxid 1310162
Total Gap Length 5841
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ARWV00000000.1