Anaplasma phagocytophilum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Anaplasmataceae; g__Anaplasma; s__Anaplasma phagocytophilum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Anaplasmataceae; g__Anaplasma; s__Anaplasma phagocytophilum
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Anaplasmataceae; g__Anaplasma; x__phagocytophilum group; s__Anaplasma phagocytophilum; x__Anaplasma phagocytophilum str. HZ2
NCBI Strain Identifiers HZ2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000964685.1)
Genome Characteristics
CheckM Completeness 99.57%
CheckM Contamination 3.5%
CheckM Strain Heterogeneity 90.91
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 1,477,581 bp
Longest Contig 1,477,581 bp
Scaffold Count 1
N50 Scaffolds 1,477,581 bp
Longest Scaffold 1,477,581 bp
Genome Size 1,477,581 bp
Protein Count 1,257
Coding Density 72.10%
GC Percentage 41.65%
Ambiguous Bases N/A
GTDB representative GCA_000964685.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM43975v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02604172
Country None
Date 2013-7-24
Genbank Assembly Accession GCA_000439755.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 1,132
Refseq Category na
Seq Rel Date 2013/07/24
Spanned Gaps 0
Species Taxid 948
SSU Count 1
Submitter University of Florida
Taxid 1184253
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None