Listeria monocytogenes_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes_B
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers N1-011A;BL0003
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000307025.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 2
N50 Contigs 3,094,342 bp
Longest Contig 3,094,342 bp
Scaffold Count 2
N50 Scaffolds 3,094,342 bp
Longest Scaffold 3,094,342 bp
Genome Size 3,243,301 bp
Protein Count 3,224
Coding Density 89.13%
GC Percentage 37.97%
Ambiguous Bases N/A
GTDB representative GCA_000307025.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM43868v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02203128
Country USA
Date 2013-8-8
Genbank Assembly Accession GCA_000438685.2
Genome Category Isolate
Genome Representation full
Isolate BL0003
Isolation Source Environment
Latitude Longitude None
Molecule Count 2
CDS Count 3,248
Refseq Category na
Seq Rel Date 2013/08/08
Spanned Gaps 0
Species Taxid 1639
SSU Count 6
Submitter University of California at Davis
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None