Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Heidelberg; x__Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069
NCBI Strain Identifiers CFSAN002069
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.15%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 8
tRNA Count 20
Contig Count 3
N50 Contigs 4,783,943 bp
Longest Contig 4,783,943 bp
Scaffold Count 3
N50 Scaffolds 4,783,943 bp
Longest Scaffold 4,783,943 bp
Genome Size 4,931,985 bp
Protein Count 4,602
Coding Density 87.12%
GC Percentage 52.08%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM43008v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01832089
Country USA:WA
Date 2013-11-25
Genbank Assembly Accession GCA_000430085.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Food
Latitude Longitude None
Molecule Count 3
CDS Count 4,925
Refseq Category na
Seq Rel Date 2013/11/25
Spanned Gaps 0
Species Taxid 28901
SSU Count 7
Submitter FDA
Taxid 1271864
Total Gap Length 0
Translation Table 11
tRNA Count (total) 84
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None