Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Actinomycetaceae; g__Actinomyces; s__Actinomyces dentalis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Actinomycetales; f__Actinomycetaceae; g__Actinomyces; s__Actinomyces dentalis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Actinomycetales; f__Actinomycetaceae; g__Actinomyces; s__Actinomyces dentalis; x__Actinomyces dentalis DSM 19115
NCBI Strain Identifiers DSM 19115
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.53%
CheckM Contamination 2.25%
CheckM Strain Heterogeneity 16.67
5S Count 0
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 100
N50 Contigs 57,724 bp
Longest Contig 183,676 bp
Scaffold Count 91
N50 Scaffolds 62,692 bp
Longest Scaffold 183,676 bp
Genome Size 3,531,393 bp
Protein Count 2,913
Coding Density 85.59%
GC Percentage 73.11%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM42922v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02440612
Country United Kingdom
Date 2013-07-15
Genbank Assembly Accession GCA_000429225.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 55.957849 N 3.187466 W
Molecule Count N/A
CDS Count 2,871
Refseq Category representative genome
Seq Rel Date 2013/07/15
Spanned Gaps 9
Species Taxid 272548
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 1120941
Total Gap Length 1771
Translation Table 11
tRNA Count (total) 49
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AUBL00000000.1