Brevundimonas aveniformis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Caulobacterales; f__Caulobacteraceae; g__Brevundimonas; s__Brevundimonas aveniformis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Caulobacterales; f__Caulobacteraceae; g__Brevundimonas; s__Brevundimonas aveniformis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Caulobacterales; f__Caulobacteraceae; g__Brevundimonas; s__Brevundimonas aveniformis; x__Brevundimonas aveniformis DSM 17977
NCBI Strain Identifiers DSM 17977
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 7
N50 Contigs 620,197 bp
Longest Contig 1,016,074 bp
Scaffold Count 6
N50 Scaffolds 620,197 bp
Longest Scaffold 1,016,074 bp
Genome Size 2,579,573 bp
Protein Count 2,586
Coding Density 92.19%
GC Percentage 65.14%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM42876v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02440608
Country South Korea
Date 2013-07-15
Genbank Assembly Accession GCA_000428765.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 36.022863 N 129.342699 E
Molecule Count N/A
CDS Count 2,566
Refseq Category representative genome
Seq Rel Date 2013/07/15
Spanned Gaps 1
Species Taxid 370977
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 1121123
Total Gap Length 2000
Translation Table 11
tRNA Count (total) 43
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AUAO00000000.1