Methylocella acidiphila
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Beijerinckiaceae; g__Methylocella; s__Methylocella acidiphila
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Beijerinckiaceae; g__Methylocapsa; s__Methylocapsa acidiphila
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Beijerinckiaceae; g__Methylocapsa; s__Methylocapsa acidiphila; x__Methylocapsa acidiphila B2
NCBI Strain Identifiers B2
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.58%
CheckM Contamination 0.31%
CheckM Strain Heterogeneity 50.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 6
N50 Contigs 1,483,237 bp
Longest Contig 1,601,484 bp
Scaffold Count 2
N50 Scaffolds 3,916,740 bp
Longest Scaffold 3,916,740 bp
Genome Size 4,103,433 bp
Protein Count 3,677
Coding Density 84.34%
GC Percentage 61.85%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM42744v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441570
Country None
Date 2013-07-15
Genbank Assembly Accession GCA_000427445.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,764
Refseq Category representative genome
Seq Rel Date 2013/07/15
Spanned Gaps 4
Species Taxid 133552
SSU Count 2
Submitter Joint Genome Institute
Taxid 395964
Total Gap Length 400
Translation Table 11
tRNA Count (total) 48
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ATYA00000000.1