Caldanaerobius polysaccharolyticus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Thermoanaerobacteria; o__Caldanaerobiales; f__Caldanaerobiaceae; g__Caldanaerobius; s__Caldanaerobius polysaccharolyticus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Thermoanaerobacterales; f__Thermoanaerobacteraceae; g__Caldanaerobius; s__Caldanaerobius polysaccharolyticus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Thermoanaerobacterales; f__Thermoanaerobacteraceae; g__Caldanaerobius; s__Caldanaerobius polysaccharolyticus; x__Caldanaerobius polysaccharolyticus DSM 13641
NCBI Strain Identifiers DSM 13641
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.52%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 3
tRNA Count 19
Contig Count 16
N50 Contigs 193,104 bp
Longest Contig 555,248 bp
Scaffold Count 3
N50 Scaffolds 1,071,729 bp
Longest Scaffold 1,226,319 bp
Genome Size 2,499,862 bp
Protein Count 2,486
Coding Density 91.12%
GC Percentage 41.94%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM42742v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00203941
Country None
Date 2014-05-01
Genbank Assembly Accession GCA_000427425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,426
Refseq Category representative genome
Seq Rel Date 2014/05/01
Spanned Gaps 13
Species Taxid 44256
SSU Count 1
Submitter JGI
Taxid 935948
Total Gap Length 1300
Translation Table 11
tRNA Count (total) 53
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ATXZ00000000.1