Mannheimia haemolytica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Mannheimia; s__Mannheimia haemolytica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Mannheimia; s__Mannheimia haemolytica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Mannheimia; s__Mannheimia haemolytica; x__Mannheimia haemolytica D171
NCBI Strain Identifiers D171
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_004342115.1)
Genome Characteristics
CheckM Completeness 99.36%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 2,501,382 bp
Longest Contig 2,501,382 bp
Scaffold Count 1
N50 Scaffolds 2,501,382 bp
Longest Scaffold 2,501,382 bp
Genome Size 2,501,382 bp
Protein Count 2,481
Coding Density 88.63%
GC Percentage 41.14%
Ambiguous Bases N/A
GTDB representative GCA_004342115.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM42727v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02056363
Country USA: Iowa
Date 2013-7-11
Genbank Assembly Accession GCA_000427275.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source feedlot
Latitude Longitude None
Molecule Count 1
CDS Count 2,405
Refseq Category na
Seq Rel Date 2013/07/11
Spanned Gaps 0
Species Taxid 75985
SSU Count 6
Submitter National Animal Disease Center
Taxid 1311759
Total Gap Length 0
Translation Table 11
tRNA Count (total) 60
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None