Paenibacillus panacisoli
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Paenibacillales; f__Paenibacillaceae; g__Paenibacillus; s__Paenibacillus panacisoli
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Paenibacillaceae; g__Paenibacillus; s__Paenibacillus panacisoli
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Paenibacillaceae; g__Paenibacillus; s__Paenibacillus panacisoli; x__Paenibacillus panacisoli DSM 21345
NCBI Strain Identifiers DSM 21345
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 56
N50 Contigs 231,925 bp
Longest Contig 679,316 bp
Scaffold Count 43
N50 Scaffolds 347,963 bp
Longest Scaffold 679,316 bp
Genome Size 6,326,414 bp
Protein Count 5,594
Coding Density 84.86%
GC Percentage 48.27%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM42654v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441525
Country South Korea
Date 2013-07-11
Genbank Assembly Accession GCA_000426545.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,506
Refseq Category na
Seq Rel Date 2013/07/11
Spanned Gaps 13
Species Taxid 363858
SSU Count 6
Submitter DOE Joint Genome Institute
Taxid 1122922
Total Gap Length 6436
Translation Table 11
tRNA Count (total) 86
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AUFO00000000.1