Acidipropionibacterium jensenii
Isolate HQ 5S/16S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Propionibacteriaceae; g__Acidipropionibacterium; s__Acidipropionibacterium jensenii
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Propionibacteriales; f__Propionibacteriaceae; g__Acidipropionibacterium; s__Acidipropionibacterium jensenii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Propionibacteriales; f__Propionibacteriaceae; g__Acidipropionibacterium; s__Acidipropionibacterium jensenii; x__Acidipropionibacterium jensenii DSM 20535
NCBI Strain Identifiers DSM 20535
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (5 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.67%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 0
tRNA Count 20
Contig Count 57
N50 Contigs 155,416 bp
Longest Contig 256,499 bp
Scaffold Count 56
N50 Scaffolds 155,416 bp
Longest Scaffold 256,499 bp
Genome Size 3,028,354 bp
Protein Count 2,721
Coding Density 89.02%
GC Percentage 68.66%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM42528v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441538
Country None
Date 2013-07-11
Genbank Assembly Accession GCA_000425285.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,681
Refseq Category representative genome
Seq Rel Date 2013/07/11
Spanned Gaps 1
Species Taxid 1749
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 1122997
Total Gap Length 370
Translation Table 11
tRNA Count (total) 50
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AUDD00000000.1