Bifidobacterium anseris
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium anseris
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium sp. AGR2158
NCBI Strain Identifiers AGR2158
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002860345.1)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.22%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 20
N50 Contigs 384,143 bp
Longest Contig 534,454 bp
Scaffold Count 19
N50 Scaffolds 384,143 bp
Longest Scaffold 534,454 bp
Genome Size 2,190,080 bp
Protein Count 1,745
Coding Density 87.06%
GC Percentage 64.18%
Ambiguous Bases N/A
GTDB representative GCA_002860345.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM42422v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441493
Country None
Date 2013-07-11
Genbank Assembly Accession GCA_000424225.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,732
Refseq Category na
Seq Rel Date 2013/07/11
Spanned Gaps 1
Species Taxid 1280675
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 1280675
Total Gap Length 2730
Translation Table 11
tRNA Count (total) 51
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AUJM00000000.1