Tetragenococcus muriaticus
Isolate HQ 5S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Tetragenococcus; s__Tetragenococcus muriaticus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Tetragenococcus; s__Tetragenococcus muriaticus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Tetragenococcus; s__Tetragenococcus muriaticus; x__Tetragenococcus muriaticus DSM 15685
NCBI Strain Identifiers DSM 15685
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.34%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 0
23S Count 1
tRNA Count 20
Contig Count 111
N50 Contigs 30,220 bp
Longest Contig 186,503 bp
Scaffold Count 109
N50 Scaffolds 30,220 bp
Longest Scaffold 186,503 bp
Genome Size 2,081,554 bp
Protein Count 2,085
Coding Density 85.51%
GC Percentage 35.94%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM42378v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441160
Country None
Date 2013-07-11
Genbank Assembly Accession GCA_000423785.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,026
Refseq Category representative genome
Seq Rel Date 2013/07/11
Spanned Gaps 2
Species Taxid 64642
SSU Count 4
Submitter DOE Joint Genome Institute
Taxid 1123359
Total Gap Length 320
Translation Table 11
tRNA Count (total) 53
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AUIQ00000000.1