Flavobacterium soli
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium soli
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium soli
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium soli; x__Flavobacterium soli DSM 19725
NCBI Strain Identifiers DSM 19725
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.65%
CheckM Contamination 0.35%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 24
N50 Contigs 400,553 bp
Longest Contig 680,451 bp
Scaffold Count 21
N50 Scaffolds 408,619 bp
Longest Scaffold 680,451 bp
Genome Size 4,002,854 bp
Protein Count 3,481
Coding Density 89.82%
GC Percentage 36.09%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM42270v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441178
Country South Korea
Date 2013-07-11
Genbank Assembly Accession GCA_000422705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 37.2366 N 131.8686 E
Molecule Count N/A
CDS Count 3,461
Refseq Category representative genome
Seq Rel Date 2013/07/11
Spanned Gaps 3
Species Taxid 344881
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 1121897
Total Gap Length 4103
Translation Table 11
tRNA Count (total) 39
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AUGO00000000.1