Ruminiclostridium papyrosolvens_A
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Acetivibrionales; f__Acetivibrionaceae; g__Ruminiclostridium; s__Ruminiclostridium papyrosolvens_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Hungateiclostridiaceae; g__Ruminiclostridium; s__Ruminiclostridium papyrosolvens
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Hungateiclostridiaceae; g__Ruminiclostridium; s__Ruminiclostridium papyrosolvens; x__Ruminiclostridium papyrosolvens C7
NCBI Strain Identifiers C7
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 3
tRNA Count 19
Contig Count 104
N50 Contigs 179,871 bp
Longest Contig 497,892 bp
Scaffold Count 104
N50 Scaffolds 179,871 bp
Longest Scaffold 497,892 bp
Genome Size 4,400,934 bp
Protein Count 3,973
Coding Density 89.40%
GC Percentage 37.13%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name CpC7
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469732
Country USA: MA
Date 2013-07-10
Genbank Assembly Accession GCA_000421965.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source collected below a freshwater pond
Latitude Longitude None
Molecule Count N/A
CDS Count 3,871
Refseq Category na
Seq Rel Date 2013/07/10
Spanned Gaps 0
Species Taxid 29362
SSU Count 1
Submitter Weizmann Institute of Science
Taxid 1330534
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ATAY00000000.1