Streptococcus equinus
Isolate HQ 5S/16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus equinus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus equinus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus equinus; x__Streptococcus equinus SN033
NCBI Strain Identifiers SN033
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000187265.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 16
Contig Count 13
N50 Contigs 241,940 bp
Longest Contig 915,989 bp
Scaffold Count 13
N50 Scaffolds 241,940 bp
Longest Scaffold 915,989 bp
Genome Size 1,843,423 bp
Protein Count 1,771
Coding Density 89.77%
GC Percentage 37.05%
Ambiguous Bases N/A
GTDB representative GCA_000187265.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM42142v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02440584
Country None
Date 2013-07-09
Genbank Assembly Accession GCA_000421425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,762
Refseq Category na
Seq Rel Date 2013/07/09
Spanned Gaps 0
Species Taxid 1335
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 1280704
Total Gap Length 0
Translation Table 11
tRNA Count (total) 29
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ATWZ00000000.1