Butyrivibrio sp000421405
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Lachnospirales; f__Lachnospiraceae; g__Butyrivibrio; s__Butyrivibrio sp000421405
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Lachnospiraceae; g__Butyrivibrio; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Lachnospiraceae; g__Butyrivibrio; s__Butyrivibrio sp. NC2007
NCBI Strain Identifiers NC2007
GTDB Type Material Designation not type material
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.57%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 4
tRNA Count 19
Contig Count 54
N50 Contigs 153,689 bp
Longest Contig 414,515 bp
Scaffold Count 54
N50 Scaffolds 153,689 bp
Longest Scaffold 414,515 bp
Genome Size 4,000,398 bp
Protein Count 3,564
Coding Density 91.77%
GC Percentage 43.61%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM42140v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02440583
Country None
Date 2013-07-09
Genbank Assembly Accession GCA_000421405.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,522
Refseq Category na
Seq Rel Date 2013/07/09
Spanned Gaps 0
Species Taxid 1280683
SSU Count 5
Submitter DOE Joint Genome Institute
Taxid 1280683
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ATWY00000000.1