Serinicoccus marinus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Dermatophilaceae; g__Serinicoccus; s__Serinicoccus marinus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Intrasporangiaceae; g__Serinicoccus; s__Serinicoccus marinus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Intrasporangiaceae; g__Serinicoccus; s__Serinicoccus marinus; x__Serinicoccus marinus DSM 15273
NCBI Strain Identifiers DSM 15273
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.55%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 29
N50 Contigs 378,189 bp
Longest Contig 490,760 bp
Scaffold Count 29
N50 Scaffolds 378,189 bp
Longest Scaffold 490,760 bp
Genome Size 3,396,505 bp
Protein Count 3,239
Coding Density 91.32%
GC Percentage 72.21%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM42124v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441241
Country South Korea
Date 2013-07-09
Genbank Assembly Accession GCA_000421245.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,204
Refseq Category representative genome
Seq Rel Date 2013/07/09
Spanned Gaps 0
Species Taxid 247333
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 1123251
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ATWM00000000.1