Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Prevotella; s__Prevotella denticola
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella denticola
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella denticola; x__Prevotella denticola DSM 20614 = JCM 13449
NCBI Strain Identifiers DSM 20614
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000613585.1)
Genome Characteristics
CheckM Completeness 99.21%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 0
23S Count 1
tRNA Count 17
Contig Count 58
N50 Contigs 121,109 bp
Longest Contig 219,377 bp
Scaffold Count 57
N50 Scaffolds 125,220 bp
Longest Scaffold 219,377 bp
Genome Size 3,056,806 bp
Protein Count 2,521
Coding Density 85.34%
GC Percentage 50.10%
Ambiguous Bases N/A
GTDB representative GCA_000613585.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM42120v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02440901
Country None
Date 2013-07-09
Genbank Assembly Accession GCA_000421205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,518
Refseq Category na
Seq Rel Date 2013/07/09
Spanned Gaps 1
Species Taxid 28129
SSU Count 0
Submitter DOE Joint Genome Institute
Taxid 1122982
Total Gap Length 10
Translation Table 11
tRNA Count (total) 45
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ATWK00000000.1