Edaphobacter sp000421065
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Acidobacteriota; c__Acidobacteriae; o__Acidobacteriales; f__Acidobacteriaceae; g__Edaphobacter; s__Edaphobacter sp000421065
Filtered NCBI Taxonomy d__Bacteria; p__Acidobacteria; c__Acidobacteriia; o__Acidobacteriales; f__Acidobacteriaceae; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Acidobacteria; c__Acidobacteriia; o__Acidobacteriales; f__Acidobacteriaceae; x__unclassified Acidobacteriaceae; s__Acidobacteriaceae bacterium TAA166
NCBI Strain Identifiers TAA 166
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.14%
CheckM Contamination 4.48%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 3
N50 Contigs 4,712,210 bp
Longest Contig 4,712,210 bp
Scaffold Count 3
N50 Scaffolds 4,712,210 bp
Longest Scaffold 4,712,210 bp
Genome Size 6,136,933 bp
Protein Count 5,276
Coding Density 86.83%
GC Percentage 58.83%
Ambiguous Bases 1
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM42106v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02440899
Country None
Date 2013-07-09
Genbank Assembly Accession GCA_000421065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,162
Refseq Category na
Seq Rel Date 2013/07/09
Spanned Gaps 0
Species Taxid 278963
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 278963
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ATWD00000000.1