NK3B98 sp000421005
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Oscillospirales; f__Oscillospiraceae; g__NK3B98; s__NK3B98 sp000421005
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; x__unclassified Clostridiales; x__unclassified Clostridiales (miscellaneous); s__Clostridiales bacterium NK3B98
NCBI Strain Identifiers NK3B98
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.33%
CheckM Contamination 0.99%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 211
N50 Contigs 36,272 bp
Longest Contig 211,673 bp
Scaffold Count 211
N50 Scaffolds 36,272 bp
Longest Scaffold 211,673 bp
Genome Size 3,040,979 bp
Protein Count 2,767
Coding Density 88.34%
GC Percentage 54.86%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM42100v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441577
Country None
Date 2013-07-09
Genbank Assembly Accession GCA_000421005.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,736
Refseq Category na
Seq Rel Date 2013/07/09
Spanned Gaps 0
Species Taxid 877414
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 877414
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ATWA00000000.1