Corynebacterium callunae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Corynebacterium; s__Corynebacterium callunae
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium callunae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium callunae; x__Corynebacterium callunae DSM 20147
NCBI Strain Identifiers DSM 20147
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000344785.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.44%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 2
23S Count 3
tRNA Count 20
Contig Count 26
N50 Contigs 238,580 bp
Longest Contig 387,085 bp
Scaffold Count 26
N50 Scaffolds 238,580 bp
Longest Scaffold 387,085 bp
Genome Size 2,885,106 bp
Protein Count 2,681
Coding Density 88.90%
GC Percentage 52.45%
Ambiguous Bases N/A
GTDB representative GCA_000344785.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM42058v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441249
Country None
Date 2013-07-09
Genbank Assembly Accession GCA_000420585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,638
Refseq Category na
Seq Rel Date 2013/07/09
Spanned Gaps 0
Species Taxid 1721
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 1121353
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ATVF00000000.1