Flavobacterium antarcticum
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium antarcticum
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium antarcticum
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium antarcticum; x__Flavobacterium antarcticum DSM 19726
NCBI Strain Identifiers DSM 19726
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.65%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 15
N50 Contigs 453,607 bp
Longest Contig 633,003 bp
Scaffold Count 15
N50 Scaffolds 453,607 bp
Longest Scaffold 633,003 bp
Genome Size 3,079,036 bp
Protein Count 2,778
Coding Density 89.37%
GC Percentage 34.97%
Ambiguous Bases 85
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM41968v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441252
Country Antarctica
Date 2013-07-09
Genbank Assembly Accession GCA_000419685.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 61.988 S 58.019 W
Molecule Count N/A
CDS Count 2,729
Refseq Category representative genome
Seq Rel Date 2013/07/09
Spanned Gaps 0
Species Taxid 271155
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 1111730
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ATTM00000000.1