Streptococcus agalactiae
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae; x__Streptococcus agalactiae MC621
NCBI Strain Identifiers MC621
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 99.91%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 44
N50 Contigs 140,499 bp
Longest Contig 263,117 bp
Scaffold Count 38
N50 Scaffolds 165,131 bp
Longest Scaffold 395,955 bp
Genome Size 2,049,265 bp
Protein Count 2,039
Coding Density 89.09%
GC Percentage 35.32%
Ambiguous Bases N/A
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name S_agalactiaeMC621-1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436766
Country USA: MO
Date 2013-7-8
Genbank Assembly Accession GCA_000419195.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood sample of individual with bacteremia
Latitude Longitude None
Molecule Count N/A
CDS Count 2,078
Refseq Category na
Seq Rel Date 2013/07/08
Spanned Gaps 6
Species Taxid 1311
SSU Count 1
Submitter The Genome Institute
Taxid 1333567
Total Gap Length 600
Translation Table 11
tRNA Count (total) 35
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ATOY00000000.1