Staphylococcus epidermidis
Isolate LQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis; x__Staphylococcus epidermidis WI09
NCBI Strain Identifiers WI09
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006742205.1)
Genome Characteristics
CheckM Completeness 98.28%
CheckM Contamination 17.24%
CheckM Strain Heterogeneity 100.0
5S Count 7
16S Count 3
23S Count 5
tRNA Count 20
Contig Count 138
N50 Contigs 96,764 bp
Longest Contig 408,323 bp
Scaffold Count 95
N50 Scaffolds 2,108,307 bp
Longest Scaffold 2,108,307 bp
Genome Size 2,762,809 bp
Protein Count 2,617
Coding Density 83.04%
GC Percentage 31.98%
Ambiguous Bases N/A
GTDB representative GCA_006742205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name WI09_v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470519
Country Germany: Ploen
Date 2013-11-26
Genbank Assembly Accession GCA_000418165.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source skin
Latitude Longitude None
Molecule Count N/A
CDS Count 2,727
Refseq Category na
Seq Rel Date 2013/11/26
Spanned Gaps 43
Species Taxid 1282
SSU Count 4
Submitter Max-Planck-Institute for Evolutionary Biology
Taxid 1344987
Total Gap Length 430
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ATDH00000000.2