Staphylococcus epidermidis
Isolate HQ 16S/23S 14 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis; x__Staphylococcus epidermidis Scl25
NCBI Strain Identifiers Scl25
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006742205.1)
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 3
tRNA Count 14
Contig Count 201
N50 Contigs 47,479 bp
Longest Contig 129,575 bp
Scaffold Count 139
N50 Scaffolds 891,487 bp
Longest Scaffold 1,024,232 bp
Genome Size 2,458,755 bp
Protein Count 2,310
Coding Density 82.99%
GC Percentage 31.87%
Ambiguous Bases N/A
GTDB representative GCA_006742205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name SCL25_v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470524
Country Germany: Ploen
Date 2013-11-21
Genbank Assembly Accession GCA_000418065.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source skin
Latitude Longitude None
Molecule Count N/A
CDS Count 2,412
Refseq Category na
Seq Rel Date 2013/11/21
Spanned Gaps 62
Species Taxid 1282
SSU Count 2
Submitter Max-Planck-Institute for Evolutionary Biology
Taxid 1344992
Total Gap Length 620
Translation Table 11
tRNA Count (total) 31
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ATDC00000000.2