Chlamydophila psittaci
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Verrucomicrobiota_A; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydophila; s__Chlamydophila psittaci
Filtered NCBI Taxonomy d__Bacteria; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydia; s__Chlamydia psittaci
Unfiltered NCBI Taxonomy d__Bacteria; x__PVC group; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; x__Chlamydia/Chlamydophila group; g__Chlamydia; s__Chlamydia psittaci; x__Chlamydia psittaci 09DC79
NCBI Strain Identifiers 09DC79
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000204255.1)
Genome Characteristics
CheckM Completeness 98.98%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 88
N50 Contigs 243,364 bp
Longest Contig 297,156 bp
Scaffold Count 67
N50 Scaffolds 379,872 bp
Longest Scaffold 478,856 bp
Genome Size 1,208,090 bp
Protein Count 1,043
Coding Density 87.93%
GC Percentage 39.30%
Ambiguous Bases N/A
GTDB representative GCA_000204255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM41760v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00860219
Country Germany
Date 2013-7-2
Genbank Assembly Accession GCA_000417605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,031
Refseq Category na
Seq Rel Date 2013/07/02
Spanned Gaps 21
Species Taxid 83554
SSU Count 1
Submitter University of Maryland School of Medicine
Taxid 1112270
Total Gap Length 1493
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ATMW00000000.1