Chlamydophila psittaci
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Verrucomicrobiota_A; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydophila; s__Chlamydophila psittaci
Filtered NCBI Taxonomy d__Bacteria; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydia; s__Chlamydia psittaci
Unfiltered NCBI Taxonomy d__Bacteria; x__PVC group; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; x__Chlamydia/Chlamydophila group; g__Chlamydia; s__Chlamydia psittaci; x__Chlamydia psittaci 09DC77
NCBI Strain Identifiers 09DC77
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000204255.1)
Genome Characteristics
CheckM Completeness 99.49%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 82
N50 Contigs 258,944 bp
Longest Contig 462,819 bp
Scaffold Count 56
N50 Scaffolds 787,558 bp
Longest Scaffold 787,558 bp
Genome Size 1,214,089 bp
Protein Count 1,046
Coding Density 87.73%
GC Percentage 39.27%
Ambiguous Bases N/A
GTDB representative GCA_000204255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM41572v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00860216
Country Germany
Date 2013-6-26
Genbank Assembly Accession GCA_000415725.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,059
Refseq Category na
Seq Rel Date 2013/06/26
Spanned Gaps 26
Species Taxid 83554
SSU Count 1
Submitter University of Maryland School of Medicine
Taxid 1112268
Total Gap Length 2342
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ATKZ00000000.1