Chlamydophila psittaci
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Verrucomicrobiota_A; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydophila; s__Chlamydophila psittaci
Filtered NCBI Taxonomy d__Bacteria; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydia; s__Chlamydia psittaci
Unfiltered NCBI Taxonomy d__Bacteria; x__PVC group; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; x__Chlamydia/Chlamydophila group; g__Chlamydia; s__Chlamydia psittaci; x__Chlamydia psittaci 01DC11
NCBI Strain Identifiers 01DC11
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000204255.1)
Genome Characteristics
CheckM Completeness 97.89%
CheckM Contamination 2.25%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 351
N50 Contigs 316,500 bp
Longest Contig 473,170 bp
Scaffold Count 307
N50 Scaffolds 1,172,625 bp
Longest Scaffold 1,172,625 bp
Genome Size 1,301,389 bp
Protein Count 1,285
Coding Density 85.95%
GC Percentage 38.56%
Ambiguous Bases N/A
GTDB representative GCA_000204255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM41552v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00860202
Country Germany
Date 2013-6-26
Genbank Assembly Accession GCA_000415525.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,251
Refseq Category na
Seq Rel Date 2013/06/26
Spanned Gaps 44
Species Taxid 83554
SSU Count 1
Submitter University of Maryland School of Medicine
Taxid 1112252
Total Gap Length 4056
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ATKP00000000.1