Enterococcus faecalis
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecalis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecalis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecalis; x__Enterococcus faecalis VC1B-1
NCBI Strain Identifiers VC1B-1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000392875.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 83
N50 Contigs 110,582 bp
Longest Contig 577,053 bp
Scaffold Count 54
N50 Scaffolds 201,748 bp
Longest Scaffold 767,299 bp
Genome Size 2,876,997 bp
Protein Count 2,747
Coding Density 88.22%
GC Percentage 37.31%
Ambiguous Bases N/A
GTDB representative GCA_000392875.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM41540v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436908
Country None
Date 2013-6-26
Genbank Assembly Accession GCA_000415405.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,870
Refseq Category na
Seq Rel Date 2013/06/26
Spanned Gaps 29
Species Taxid 1351
SSU Count 1
Submitter The Genome Institute
Taxid 1244143
Total Gap Length 580
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ATIZ00000000.1