Streptococcus intermedius
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus intermedius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus intermedius
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; x__Streptococcus anginosus group; s__Streptococcus intermedius; x__Streptococcus intermedius SK54 = ATCC 27335
NCBI Strain Identifiers ATCC 27335
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (39 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 10
N50 Contigs 266,223 bp
Longest Contig 551,793 bp
Scaffold Count 10
N50 Scaffolds 266,223 bp
Longest Scaffold 551,793 bp
Genome Size 1,951,449 bp
Protein Count 1,875
Coding Density 87.36%
GC Percentage 37.66%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Stre_inte_ATCC_27335_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02596988
Country None
Date 2013-06-21
Genbank Assembly Accession GCA_000413475.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,883
Refseq Category na
Seq Rel Date 2013/06/21
Spanned Gaps 0
Species Taxid 1338
SSU Count 4
Submitter Broad Institute
Taxid 1095731
Total Gap Length 0
Translation Table 11
tRNA Count (total) 61
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ATFK00000000.1