Pasteurella multocida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; sb__Pasteurella multocida subsp. multocida; x__Pasteurella multocida subsp. multocida P1062
NCBI Strain Identifiers P1062
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 0.23%
CheckM Strain Heterogeneity 100.0
5S Count 5
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 5
N50 Contigs 1,305,602 bp
Longest Contig 1,305,602 bp
Scaffold Count 1
N50 Scaffolds 2,699,012 bp
Longest Scaffold 2,699,012 bp
Genome Size 2,699,012 bp
Protein Count 2,411
Coding Density 83.80%
GC Percentage 40.30%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Chromosome
Assembly Name P1062v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470583
Country USA
Date 2013-11-16
Genbank Assembly Accession GCA_000413135.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source lungs from a calf with respiratory disease
Latitude Longitude None
Molecule Count 1
Protein Count 2,369
Refseq Category na
Seq Rel Date 2013/11/16
Spanned Gaps 5
Species Taxid 747
SSU Count 6
Submitter University of Idaho
Taxid 1331042
Total Gap Length 189984
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ASZP00000000.2