Euryhalocaulis caribicus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Caulobacterales; f__Maricaulaceae; g__Euryhalocaulis; s__Euryhalocaulis caribicus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Hyphomonadaceae; g__Euryhalocaulis; s__Euryhalocaulis caribicus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Hyphomonadaceae; g__Euryhalocaulis; s__Euryhalocaulis caribicus
NCBI Strain Identifiers JL2009
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.84%
CheckM Contamination 0.44%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 39
N50 Contigs 155,932 bp
Longest Contig 370,916 bp
Scaffold Count 39
N50 Scaffolds 155,932 bp
Longest Scaffold 370,916 bp
Genome Size 3,323,095 bp
Protein Count 3,212
Coding Density 91.39%
GC Percentage 63.94%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name jl2009
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02053529
Country None
Date 2013-06-18
Genbank Assembly Accession GCA_000412185.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source surface water from the Caribbean Sea
Latitude Longitude 12.79 N 70.32 W
Molecule Count N/A
CDS Count 3,195
Refseq Category representative genome
Seq Rel Date 2013/06/18
Spanned Gaps 0
Species Taxid 1161401
SSU Count 1
Submitter Xiamen University
Taxid 1161401
Total Gap Length 0
Translation Table 11
tRNA Count (total) 42
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ASJA00000000.1