Pasteurella multocida
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; x__Pasteurella multocida 671/90
NCBI Strain Identifiers 90;671/90;671
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 21
N50 Contigs 311,791 bp
Longest Contig 578,571 bp
Scaffold Count 21
N50 Scaffolds 311,791 bp
Longest Scaffold 578,571 bp
Genome Size 2,245,203 bp
Protein Count 2,052
Coding Density 89.85%
GC Percentage 40.23%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Pmultocida_hybrid671-90
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470557
Country United Kingdom
Date 2013-6-18
Genbank Assembly Accession GCA_000412075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source calf 1183
Latitude Longitude None
Molecule Count 0
Protein Count 2,057
Refseq Category na
Seq Rel Date 2013/06/18
Spanned Gaps 0
Species Taxid 747
SSU Count 1
Submitter Moredun Research Institute
Taxid 1290393
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ARWR00000000.1