Pauljensenia sp000411415
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Actinomycetaceae; g__Pauljensenia; s__Pauljensenia sp000411415
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Actinomycetales; f__Actinomycetaceae; g__Actinomyces; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Actinomycetales; f__Actinomycetaceae; g__Actinomyces; s__Actinomyces sp. HPA0247
NCBI Strain Identifiers HPA0247
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.47%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 14
N50 Contigs 377,615 bp
Longest Contig 501,135 bp
Scaffold Count 3
N50 Scaffolds 1,289,359 bp
Longest Scaffold 1,289,359 bp
Genome Size 2,430,444 bp
Protein Count 2,003
Coding Density 87.32%
GC Percentage 65.08%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Acti_sp_HPA0247_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02596975
Country None
Date 2013-6-14
Genbank Assembly Accession GCA_000411415.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,993
Refseq Category na
Seq Rel Date 2013/06/14
Spanned Gaps 11
Species Taxid 1203556
SSU Count 5
Submitter Broad Institute
Taxid 1203556
Total Gap Length 2060
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ATCA00000000.1