Corynebacterium amycolatum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Corynebacterium; s__Corynebacterium amycolatum
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium sp. HFH0082
NCBI Strain Identifiers HFH0082
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000173655.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 14
N50 Contigs 370,108 bp
Longest Contig 595,725 bp
Scaffold Count 1
N50 Scaffolds 2,493,224 bp
Longest Scaffold 2,493,224 bp
Genome Size 2,493,224 bp
Protein Count 2,122
Coding Density 87.98%
GC Percentage 58.86%
Ambiguous Bases N/A
GTDB representative GCA_000173655.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Cory_sp_HFH0082_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02596730
Country None
Date 2013-6-14
Genbank Assembly Accession GCA_000411235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,100
Refseq Category na
Seq Rel Date 2013/06/14
Spanned Gaps 13
Species Taxid 1078764
SSU Count 2
Submitter Broad Institute
Taxid 1078764
Total Gap Length 21596
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGEM00000000.1