Novosphingobium capsulatum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Novosphingobium; s__Novosphingobium capsulatum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Novosphingobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Novosphingobium; s__Novosphingobium sp. B-7
NCBI Strain Identifiers B-7
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001598375.1)
Genome Characteristics
CheckM Completeness 97.03%
CheckM Contamination 1.45%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 5
23S Count 4
tRNA Count 20
Contig Count 848
N50 Contigs 13,701 bp
Longest Contig 62,474 bp
Scaffold Count 491
N50 Scaffolds 21,685 bp
Longest Scaffold 82,109 bp
Genome Size 4,909,165 bp
Protein Count 4,814
Coding Density 87.53%
GC Percentage 65.08%
Ambiguous Bases N/A
GTDB representative GCA_001598375.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM41061v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469431
Country None
Date 2013-06-17
Genbank Assembly Accession GCA_000410615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source steeping fluid of eroded bamboo slips
Latitude Longitude None
Molecule Count N/A
CDS Count 4,735
Refseq Category na
Seq Rel Date 2013/06/17
Spanned Gaps 357
Species Taxid 1298855
SSU Count 6
Submitter Environmental engineering institut, Central south university, Hunan Province, China
Taxid 1298855
Total Gap Length 45035
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master APCQ00000000.1