Lacticaseibacillus paracasei
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lacticaseibacillus; s__Lacticaseibacillus paracasei
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus paracasei
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; x__Lactobacillus casei group; s__Lactobacillus paracasei; sb__Lactobacillus paracasei subsp. tolerans; x__Lactobacillus paracasei subsp. tolerans Lpl14
NCBI Strain Identifiers Lpl14
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000829035.1)
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.29%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 141
N50 Contigs 44,919 bp
Longest Contig 135,947 bp
Scaffold Count 141
N50 Scaffolds 44,919 bp
Longest Scaffold 135,947 bp
Genome Size 3,014,095 bp
Protein Count 3,000
Coding Density 85.22%
GC Percentage 46.27%
Ambiguous Bases 1
GTDB representative GCA_000829035.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM41033v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469703
Country None
Date 2013-06-11
Genbank Assembly Accession GCA_000410335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source plant (cereals)
Latitude Longitude None
Molecule Count N/A
CDS Count 3,120
Refseq Category na
Seq Rel Date 2013/06/11
Spanned Gaps 0
Species Taxid 1597
SSU Count 1
Submitter D
Taxid 1256229
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANKB00000000.1