Pasteurella multocida
Isolate HQ 16S/23S 13 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; x__Pasteurella multocida 1500E
NCBI Strain Identifiers 1500E
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 98.41%
CheckM Contamination 1.02%
CheckM Strain Heterogeneity 66.67
5S Count 0
16S Count 1
23S Count 4
tRNA Count 13
Contig Count 265
N50 Contigs 16,026 bp
Longest Contig 64,511 bp
Scaffold Count 265
N50 Scaffolds 16,026 bp
Longest Scaffold 64,511 bp
Genome Size 2,210,576 bp
Protein Count 2,194
Coding Density 90.12%
GC Percentage 40.25%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 1500E
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470554
Country United Kingdom: Scotland
Date 2013-6-11
Genbank Assembly Accession GCA_000409915.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source nasal sample
Latitude Longitude None
Molecule Count 0
Protein Count 2,149
Refseq Category na
Seq Rel Date 2013/06/11
Spanned Gaps 0
Species Taxid 747
SSU Count 2
Submitter Moredun Research Institute
Taxid 1298924
Total Gap Length 0
Translation Table 11
tRNA Count (total) 18
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AQTL00000000.1