Escherichia coli_D
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli_D
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli KTE37
NCBI Strain Identifiers KTE37
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000026325.2)
Genome Characteristics
CheckM Completeness 99.64%
CheckM Contamination 0.49%
CheckM Strain Heterogeneity 25.0
5S Count 5
16S Count 4
23S Count 4
tRNA Count 18
Contig Count 66
N50 Contigs 212,086 bp
Longest Contig 352,785 bp
Scaffold Count 25
N50 Scaffolds 453,026 bp
Longest Scaffold 1,303,524 bp
Genome Size 5,550,382 bp
Protein Count 5,416
Coding Density 87.10%
GC Percentage 50.50%
Ambiguous Bases N/A
GTDB representative GCA_000026325.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Esch_coli_KTE37_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00847672
Country None
Date 2013-6-4
Genbank Assembly Accession GCA_000407985.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,857
Refseq Category na
Seq Rel Date 2013/06/04
Spanned Gaps 41
Species Taxid 562
SSU Count 4
Submitter Broad Institute
Taxid 1169354
Total Gap Length 37141
Translation Table 11
tRNA Count (total) 74
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ASUC00000000.1