Enterococcus_E cecorum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_E; s__Enterococcus_E cecorum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus cecorum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus cecorum; x__Enterococcus cecorum DSM 20682 = ATCC 43198
NCBI Strain Identifiers ATCC 43198
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (27 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.17%
CheckM Contamination 0.66%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 6
N50 Contigs 1,060,610 bp
Longest Contig 1,158,014 bp
Scaffold Count 6
N50 Scaffolds 1,060,610 bp
Longest Scaffold 1,158,014 bp
Genome Size 2,408,477 bp
Protein Count 2,381
Coding Density 87.02%
GC Percentage 36.49%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Ente_ceco_ATCC43198_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02596960
Country None
Date 2013-05-31
Genbank Assembly Accession GCA_000407565.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,364
Refseq Category na
Seq Rel Date 2013/05/31
Spanned Gaps 0
Species Taxid 44008
SSU Count 6
Submitter Broad Institute
Taxid 1121864
Total Gap Length 0
Translation Table 11
tRNA Count (total) 71
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ASWI00000000.1