Enterococcus_A raffinosus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_A; s__Enterococcus_A raffinosus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus raffinosus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus raffinosus; x__Enterococcus raffinosus ATCC 49464
NCBI Strain Identifiers ATCC 49464
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001886185.1)
Genome Characteristics
CheckM Completeness 99.31%
CheckM Contamination 3.78%
CheckM Strain Heterogeneity 0.0
5S Count 11
16S Count 11
23S Count 14
tRNA Count 20
Contig Count 9
N50 Contigs 1,007,288 bp
Longest Contig 1,028,836 bp
Scaffold Count 9
N50 Scaffolds 1,007,288 bp
Longest Scaffold 1,028,836 bp
Genome Size 4,310,366 bp
Protein Count 4,216
Coding Density 86.08%
GC Percentage 39.40%
Ambiguous Bases N/A
GTDB representative GCA_001886185.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Ente_raff_ATCC49464_V2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02596957
Country None
Date 2013-05-31
Genbank Assembly Accession GCA_000407525.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,146
Refseq Category na
Seq Rel Date 2013/05/31
Spanned Gaps 0
Species Taxid 71452
SSU Count 11
Submitter Broad Institute
Taxid 1158602
Total Gap Length 0
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ASWF00000000.1