Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Dickeya; s__Dickeya dadantii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pectobacteriaceae; g__Dickeya; s__Dickeya dadantii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pectobacteriaceae; g__Dickeya; s__Dickeya dadantii; x__Dickeya dadantii NCPPB 898
NCBI Strain Identifiers NCPPB 898
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (6 genomes in species cluster)
Genome Characteristics
CheckM Completeness 97.03%
CheckM Contamination 1.85%
CheckM Strain Heterogeneity 78.95
5S Count 5
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 52
N50 Contigs 191,282 bp
Longest Contig 475,876 bp
Scaffold Count 12
N50 Scaffolds 4,829,443 bp
Longest Scaffold 4,829,443 bp
Genome Size 4,937,637 bp
Protein Count 4,324
Coding Density 85.47%
GC Percentage 56.32%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Chromosome
Assembly Name DDA898_1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470086
Country None
Date 2013-06-20
Genbank Assembly Accession GCA_000406145.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 4,392
Refseq Category na
Seq Rel Date 2013/06/20
Spanned Gaps 40
Species Taxid 204038
SSU Count 1
Submitter James Hutton Institute
Taxid 1223572
Total Gap Length 4000
Translation Table 11
tRNA Count (total) 62
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AOOE00000000.1