Methanomassiliicoccus intestinalis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Thermoplasmatota; c__Thermoplasmata; o__Methanomassiliicoccales; f__Methanomassiliicoccaceae; g__Methanomassiliicoccus; s__Methanomassiliicoccus intestinalis
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Thermoplasmata; o__Methanomassiliicoccales; f__Methanomassiliicoccaceae; g__Methanomassiliicoccus; s__Candidatus Methanomassiliicoccus intestinalis
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; x__Diaforarchaea group; c__Thermoplasmata; o__Methanomassiliicoccales; f__Methanomassiliicoccaceae; g__Methanomassiliicoccus; s__Candidatus Methanomassiliicoccus intestinalis; x__Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
NCBI Strain Identifiers Issoire-Mx1
GTDB Type Material Designation not type material
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.79%
CheckM Contamination 0.81%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 1
N50 Contigs 1,931,651 bp
Longest Contig 1,931,651 bp
Scaffold Count 1
N50 Scaffolds 1,931,651 bp
Longest Scaffold 1,931,651 bp
Genome Size 1,931,651 bp
Protein Count 1,855
Coding Density 88.29%
GC Percentage 41.26%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM40422v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03081468
Country France
Date 2013-6-3
Genbank Assembly Accession GCA_000404225.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source enrichment culture from feces
Latitude Longitude None
Molecule Count 1
CDS Count 1,831
Refseq Category na
Seq Rel Date 2013/06/03
Spanned Gaps 0
Species Taxid 1406512
SSU Count 1
Submitter Universite d'Auvergne
Taxid 1295009
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None